Sequence ID | >ENV08001567 |
Genome ID | ABNJ01011845 |
Phylum/Class | mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA |
Species | |
Start position on genome
|
92
|
End posion on genome
|
2
|
Amino Acid
|
Ser
|
Anticodon
|
TGA
|
Upstream region at tRNA start position
|
ttcggcgttc
|
tRNA gene sequence
|
GGAGGGGTGGCAGAGTGGTTTAATGCACCGGTCTTGAAAACCGGCGTGGGTTTATAGCCC ACCCAGGGTTCAAATCCCTGCTCCTCCGCCA
|
Downstream region at tRNA end position
|
tnnnnnnnnn
|
Secondary structure (Cloverleaf model) | >ENV08001567 Ser TGA
c GCCA tnnnnnnnnn
G - C
G - C
A - T
G - C
G - C
G + T
G - C T A
T G T C C C A
T G A G | | | | | A
G G A C G C A G G G C
G | | | T T
T A T G C
T T A A CGTGGGTTTATAGCCCACC
C - G
C - G
G - C
G - C
T - A
C A
T A
T G A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |