Sequence ID | >ENV08001570 |
Genome ID | ABNJ01014523 |
Phylum/Class | mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA |
Species | |
Start position on genome
|
121
|
End posion on genome
|
27
|
Amino Acid
|
SeC
|
Anticodon
|
TCA
|
Upstream region at tRNA start position
|
nnnnnnnntt
|
tRNA gene sequence
|
GGAAGAACGTCGTCTCCGGTGAGGCGTCCGGATTTCAAATCCGGGTAGGGCTGCCAGCAG TCCTGGGTAGGTTCGACTCCTATGTTCTTCCGCCA
|
Downstream region at tRNA end position
|
attctcatag
|
Secondary structure (Cloverleaf model) | >ENV08001570 SeC TCA
t GCCA attctcatag
G - C
G - C
A - T
A - T
G - C
A - T
A - T
C - G T C
G T A T C C A
C C T T + | | | | G
G C T G C G T A G G C
G | + | | T T
T G G C G
G A T GTAGGGCTGCCAGCAGTCCTGG
C - G
C - G
G - C
G - C
A - T
T A
T A
T C A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |