The detailed information of tRNA gene sequence


Sequence ID>ENV08001572
Genome IDABNJ01018487
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 35
End posion on genome 120
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aggtattcgt
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGATCAGACTGTAAATCTGACGGCTCAGCCTTCGAA
GGTTCGAATCCTTTCTCCCTCCACC
Downstream region at tRNA end position 
Atcnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001572	Tyr	GTA
                   t      CACC Atcnnnnnnn
                     G - C
                     G + T
                     A   C
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T T T C C     A
      T G A        T      + | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCAGCCTTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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