The detailed information of tRNA gene sequence


Sequence ID>ENV08001574
Genome IDABNJ01021258
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 89
End posion on genome 3
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
taaagagttt
tRNA gene sequence 
GCCCGAGTGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGCTGGTAACAGCGTG
CCAGTTCAAGTCTGGCCTCGGGTACCA
Downstream region at tRNA end position 
aannnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001574	Leu	TAA
                   t      ACCA aannnnnnnn
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     C G G T C     A
      T A A        G      | | | | |     A
    C       G G T G       G C C A G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTGGTAACAGCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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