The detailed information of tRNA gene sequence


Sequence ID>WENV183788538
Genome IDPPYF01370155
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 240996
End posion on genome 240902
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttaaaaat
tRNA gene sequence 
GGAAGATCATCGTCCCCGGTGGGGCGGCTGGACTTCAAATCCAGATGGGGCCGCCAGCGG
TCCTTGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
ctttgtatta
Secondary structure (Cloverleaf model)
>WENV183788538	SeC	TCA
                   t      GCCA ctttgtatta
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    A     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     ATGGGGCCGCCAGCGGTCCTTG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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