The detailed information of tRNA gene sequence


Sequence ID>WENV183788845
Genome IDPPYF01370699
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 17
End posion on genome 111
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCGTCTCCGGTGAGGCGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCTGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatcgcttc
Secondary structure (Cloverleaf model)
>WENV183788845	SeC	TCA
                   c      GCCA aaatcgcttc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G A          G     TTGGGGCCGCCAGCGGTCCTGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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