The detailed information of tRNA gene sequence


Sequence ID>ENV08001584
Genome IDABNJ01041013
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 34
End posion on genome 117
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgaataccat
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAA
GGTTCGAATCCCTTCCCCACACCAn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001584	Tyr	GTA
                   t      CCAn nnnnnnnnnn
                     G   A
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        T      + |   | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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