The detailed information of tRNA gene sequence


Sequence ID>ENV08001586
Genome IDABNJ01048922
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 85
End posion on genome 9
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
ttcaaacagt
tRNA gene sequence 
GCACCCGTAGCTCAGTTGGTTAGAGCACTACCTTGACATGGTAGGGGTCGGTGGTTCGAG
TCCACTCGGGTGTACCA
Downstream region at tRNA end position 
tttcttatnn
Secondary structure (Cloverleaf model)
>ENV08001586	Val	GAC
                   t      ACCA tttcttatnn
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T C A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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