The detailed information of tRNA gene sequence


Sequence ID>WENV183790256
Genome IDPPYF01411116
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 1201
End posion on genome 1289
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttcggaatat
tRNA gene sequence 
GGAAAGGTGCTCGAGTGGCTGAAGAGGCACGCCTGGAAAGCGTGTAACCGGCAAAACCGG
TTCGGGGGTTCGAATCCCCCTCTTTCCGCtt
Downstream region at tRNA end position 
ttatatatat
Secondary structure (Cloverleaf model)
>WENV183790256	Ser	GGA
                   t      GCtt ttatatatat
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G C T C       G G G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAACCGGCAAAACCGGTTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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