The detailed information of tRNA gene sequence


Sequence ID>ENV08001595
Genome IDABNJ01058967
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 10
End posion on genome 96
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
ngaagattat
tRNA gene sequence 
GCCAGTGTGGTGAAATCGGTAGACACACGGGATTCAAAATCCCGCGCCCTTAAAAGCGTG
CCAGTTCGAGTCTGGCCACTGGTACCA
Downstream region at tRNA end position 
cttcaaagcc
Secondary structure (Cloverleaf model)
>ENV08001595	Leu	CAA
                   t      ACCA cttcaaagcc
                     G + T
                     C - G
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C G G T C     A
      T A A        G      | | | | |     G
    C       A G T G       G C C A G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCCCTTAAAAGCGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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