The detailed information of tRNA gene sequence


Sequence ID>ENV08001596
Genome IDABNJ01059843
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 29
End posion on genome 112
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgaataccat
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGATTTCGAA
GGTTCGAATCCTTCCCCCACACCAt
Downstream region at tRNA end position 
cnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001596	Tyr	GTA
                   t      CCAt cnnnnnnnnn
                     G   A
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGATTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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