Sequence ID | >ENV08001601 |
Genome ID | ABNJ01071777 |
Phylum/Class | mosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA |
Species | |
Start position on genome
|
91
|
End posion on genome
|
5
|
Amino Acid
|
Leu
|
Anticodon
|
CAA
|
Upstream region at tRNA start position
|
tgaagattat
|
tRNA gene sequence
|
GCCAGTGTGGTGAAATCGGTAGACACACGGGATTCAAAATCCCGCGCCCTTAAAAGCGTG CCAGTTCGAGTCTGGCCACTGGTACCA
|
Downstream region at tRNA end position
|
cttcnnnnnn
|
Secondary structure (Cloverleaf model) | >ENV08001601 Leu CAA
t ACCA cttcnnnnnn
G + T
C - G
C - G
A - T
G - C
T - A
G - C T G
T C G G T C A
T A A G | | | | | G
C A G T G G C C A G C
G | | | T T
G A C A C
T A G A CGCCCTTAAAAGCGT
C - G
G - C
G - C
G - C
A - T
T A
T A
C A A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |