The detailed information of tRNA gene sequence


Sequence ID>WENV183791313
Genome IDPPYF01435443
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 30
End posion on genome 124
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGGCGCCAGCGT
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaattcttac
Secondary structure (Cloverleaf model)
>WENV183791313	SeC	TCA
                   c      GCCA aaattcttac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGGCGCCAGCGTTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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