The detailed information of tRNA gene sequence


Sequence ID>ENV08001612
Genome IDABNJ01097129
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 21
End posion on genome 105
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgaataccat
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAA
GGTTCGAATCCTTCCCCCACCACCA
Downstream region at tRNA end position 
tcttcnnnnn
Secondary structure (Cloverleaf model)
>ENV08001612	Tyr	GTA
                   t      ACCA tcttcnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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