The detailed information of tRNA gene sequence


Sequence ID>WENV183792810
Genome IDPPYF01463324
Search identical group
Phylum/Class[PPYF] human gut metagenome; stool from patient with Crohn's disease
Species
Start position on genome 6217
End posion on genome 6144
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnncat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCATTCGTTCGAGT
CGGATCTCCGCAACta
Downstream region at tRNA end position 
caatgaggat
Secondary structure (Cloverleaf model)
>WENV183792810	fMet	CAT
                   t      ACta caatgaggat
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T A G G C     A
      T G A        G      | | + | |     G
    T       C G A G       A T T C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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