The detailed information of tRNA gene sequence


Sequence ID>ENV08001620
Genome IDABNJ01118028
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 101
End posion on genome 26
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
nnntaattat
tRNA gene sequence 
NCGACATTAGCTCAGTTGGTAGAGCGATACCTTGCCAAGGTATAGGTCATCGGTTCGAAC
CCGATATGTCGCTCCA
Downstream region at tRNA end position 
aataaaaatt
Secondary structure (Cloverleaf model)
>ENV08001620	Gly	GCC
                   t      TCCA aataaaaatt
                     N   C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T
                     T - A          C A
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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