The detailed information of tRNA gene sequence


Sequence ID>ENV08001623
Genome IDABNJ01128988
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 14
End posion on genome 98
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tgaataccat
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAA
GGTTCGAATCCTTCCCCCACCACCA
Downstream region at tRNA end position 
tcttctctcn
Secondary structure (Cloverleaf model)
>ENV08001623	Tyr	GTA
                   t      ACCA tcttctctcn
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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