The detailed information of tRNA gene sequence


Sequence ID>ENV08001630
Genome IDABNJ01140808
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 91
End posion on genome 15
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gtaagatctt
tRNA gene sequence 
CGGTGATTAGCGCAGTCCGGTAGCGCATCTGGTTTGGGACCAGAGGGTCAGAGGTTCGAA
TCCTCTATCACCGACCA
Downstream region at tRNA end position 
ctttattgtc
Secondary structure (Cloverleaf model)
>ENV08001630	Pro	TGG
                   t      ACCA ctttattgtc
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      T G A        A      | | | | |     G
    C       C G C G       A G A G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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