The detailed information of tRNA gene sequence


Sequence ID>ENV08001631
Genome IDABNJ01142409
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 92
End posion on genome 18
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ccaagttgat
tRNA gene sequence 
TGGGGTATCGCCAAGTGGTAAGGCACCGGGTTTTGATCTCGGCATTCCAAGGTTCGAATC
CTTGTACCCCAGCCA
Downstream region at tRNA end position 
tggcaatgta
Secondary structure (Cloverleaf model)
>ENV08001631	Gln	TTG
                   t      GCCA tggcaatgta
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     G T T C C     A
        G A        C      | | | | |     G
      T     A C C G       C A A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATTC
                    C - G
                    C - G
                    G - C
                    G + T
                    G - C
                  T       T
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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