The detailed information of tRNA gene sequence


Sequence ID>ENV08001633
Genome IDABNJ01150098
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 81
End posion on genome 7
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
ttatatccca
tRNA gene sequence 
GGTCGCTTAGCTCAGCTGGGAGAGCACCTCCCTTACAAGGAGGGGTCACTGGTTCGAGCC
CAGTAGCGACCACCA
Downstream region at tRNA end position 
tattctnnnn
Secondary structure (Cloverleaf model)
>ENV08001633	Val	TAC
                   a      ACCA tattctnnnn
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     C - G
                     T - A          C G
                    T     T G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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