The detailed information of tRNA gene sequence


Sequence ID>ENV08001637
Genome IDABNJ01188323
Search identical group
Phylum/Classmosquito metagenome; viral fraction from mixed species mosquitoes collected at Buena Vista Lagoon in Oceanside, CA
Species
Start position on genome 90
End posion on genome 15
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tantagatnt
tRNA gene sequence 
TCGTGATTAGCGCATCCGGTAGCGCATCTGGTTTGGGACCAGAGGGTCAGAGGTTCGAAT
CCTCTATCACCGACCA
Downstream region at tRNA end position 
ctttattgtc
Secondary structure (Cloverleaf model)
>ENV08001637	Pro	TGG
                   t      ACCA ctttattgtc
                     T + G
                     C   C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      C T A        A      | | | | |     G
    C       C G C G       A G A G G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK