The detailed information of tRNA gene sequence


Sequence ID>ENV08001648
Genome IDABNK01019413
Search identical group
Phylum/Classcoral metagenome; viral fraction from whole Porites compressa tissue extracts taken directly off the reef at the Hawai'i Marine Laboratory Refuge Point Reef Corals collected 3 meters apart and at 3 meters depth and rinsed extensively in filtered autoclaved seawater before processing
Species
Start position on genome 24
End posion on genome 96
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
gtcgatgtct
tRNA gene sequence 
TGTGGCGTAGTTCAATAGGCAGAACACCGGATTCTGAATTCGGCGGTTGACAGTTCGACT
CTGTCCGCCACATttg
Downstream region at tRNA end position 
agagnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001648	Gln	CTG
                   t      Tttg agagnnnnnn
                     T - A
                     G - C
                     T - A
                     G - C
                     G - C
                     C - G
                     G - C          T C
                    T     C T G T C     A
      T A A        A      | | | | |     G
    A       C T T G       G A C A G     C
    G       | | | |                 T T
    G       G A A C
      C A          A     CGGTT
                    C - G
                    C - G
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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