The detailed information of tRNA gene sequence


Sequence ID>ENV08001653
Genome IDABNL01003668
Search identical group
Phylum/Classcoral metagenome; viral fraction from whole Porites compressa tissue extracts taken from an aquarium control experiment that consisted of 5 liters of ambient seawater that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours
Species
Start position on genome 43
End posion on genome 118
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tattttattt
tRNA gene sequence 
GACCCGTTAGCTCAGCTGGTAGAGCATCTCCCTTTTAAGGAGGTGGCCGAAGGTTCGAAT
CCTTCACGGGTCACCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001653	Lys	TTT
                   t      ACCA gnnnnnnnnn
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     C T T C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGCC
                    T + G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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