Sequence ID | >ENV08001666 |
Genome ID | ABNO01002212 |
Phylum/Class | coral metagenome; viral fraction from whole Porites compressa tissue extracts taken from a reduced pH stressor experiment that consisted of 5 liters of seawater with molecular grade HCl added to a final pH 68 that was changed every 24 hours; collected at 1 (n =9), 4 (n =9), 16 (n =9), and 64 (n =9) hours |
Species | |
Start position on genome
|
92
|
End posion on genome
|
2
|
Amino Acid
|
Lys
|
Anticodon
|
CTT
|
Upstream region at tRNA start position
|
acagagtttt
|
tRNA gene sequence
|
GGACCGGTGGCCAGAGTGGACGAAGGCGTCGGATTCTTAATCCGAAGGGCGAAAGCCCCG ACCGTGGGTTCGAATCCCACCCGGTCCTCCA
|
Downstream region at tRNA end position
|
annnnnnnnn
|
Secondary structure (Cloverleaf model) | >ENV08001666 Lys CTT
t TCCA annnnnnnnn
G - C
G - C
A - T
C - G
C - G
G - C
G - C T A
T C A C C C A
T G A G G | | | | | G
G A C C G G T G G G C
G | | | T T
A A G G C
C G A G AGGGCGAAAGCCCCGACC
T - A
C - G
G - C
G - C
A - T
T A
T A
C T T
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |