Sequence ID | >ENV08001682 |
Genome ID | ABNY01006742 |
Phylum/Class | saltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA |
Species | |
Start position on genome
|
128
|
End posion on genome
|
52
|
Amino Acid
|
Met
|
Anticodon
|
CAT
|
Upstream region at tRNA start position
|
nnnnnnnnnn
|
tRNA gene sequence
|
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGCGGTTCAAA TCCGTCCCCCGCAACCA
|
Downstream region at tRNA end position
|
attcctttta
|
Secondary structure (Cloverleaf model) | >ENV08001682 Met CAT
n ACCA attcctttta
C A
G - C
C - G
G - C
G - C
G - C
G - C T A
T C T G C C A
T G A G | + | | | A
C C G A G G G C G G C
T | | | | T T
G G C T C
G T A G AGGTC
T - A
C - G
A - T
G - C
G - C
C A
T A
C A T
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |