The detailed information of tRNA gene sequence


Sequence ID>ENV08001684
Genome IDABNY01007726
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 117
End posion on genome 44
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
ngaaaaatat
tRNA gene sequence 
TGGGGCATAGCCAAGCGGTAAGGCACGGGTTTTTGGTACCTGCATCCTAGGTTCGAATCC
TAGCGCCCCAGCCA
Downstream region at tRNA end position 
aatatgattt
Secondary structure (Cloverleaf model)
>ENV08001684	Gln	TTG
                   t      GCCA aatatgattt
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A   C          T A
                    T     G A T C C     A
        G A        A      | | | | |     G
      C     A C C G       C T A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATC
                    C - G
                    G + T
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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