The detailed information of tRNA gene sequence


Sequence ID>ENV08001685
Genome IDABNY01008451
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 23
End posion on genome 96
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gttattcaaT
tRNA gene sequence 
GCCTACGTGGTCCAACGGCTAAGACATATCCCTGTCGCGGATATAACCCGGGTTCAACTC
CCGGCGTGGGCGTaa
Downstream region at tRNA end position 
ttcttataaa
Secondary structure (Cloverleaf model)
>ENV08001685	Asp	GTC
                   T      GTaa ttcttataaa
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T
                     C - G
                     G - C          T C
                    T     G G C C C     A
      C A A        G      | | | | |     A
    G       C C T G       C C G G G     C
    G         | | |                 T T
    C       A G A C
      T A          A     TAAC
                    T - A
                    A - T
                    T - A
                    C - G
                    C - G
                  C       C
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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