The detailed information of tRNA gene sequence


Sequence ID>ENV08001687
Genome IDABNY01010710
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 89
End posion on genome 16
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgttaacata
tRNA gene sequence 
GCCGTGATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAACGGTCCCCGGTTCGAT
CCCGGGTCGCGCTAttt
Downstream region at tRNA end position 
tttatttaat
Secondary structure (Cloverleaf model)
>ENV08001687	Phe	GAA
                   a      Attt tttatttaat
                     G + T
                     C   C
                     C - G
                     G - C
                     T + G
                     G - C
                     A - T          C T
                    T     G G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ACGGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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