The detailed information of tRNA gene sequence


Sequence ID>ENV08001689
Genome IDABNY01011527
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 100
End posion on genome 24
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
accaaacaat
tRNA gene sequence 
TGGCCCGTAGTGTAACTGGTTTAGCACGTAAGTCTTTGAAACTTGCAGTAAGGGTTCGAA
TCCCTTCGGGTCTGCCT
Downstream region at tRNA end position 
aatttttatt
Secondary structure (Cloverleaf model)
>ENV08001689	Gln	TTG
                   t      GCCT aatttttatt
                     T   T
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T T C C C     A
    T C A A        A      | | | | |     G
  G         T G T G       A A G G G     C
  G         + | | |                 T T
  T         G C A C
    T T A          G     CAGT
                    T + G
                    A - T
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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