The detailed information of tRNA gene sequence


Sequence ID>ENV08001692
Genome IDABNY01017929
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 31
End posion on genome 107
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acactttttC
tRNA gene sequence 
GGGGTTGTAGCGTAGCCCGGTCATCGCGCCTGCTTTGGGAGCAGGAGGTCGCAGGTTCGA
ATCCTGCCCACCCCGAtt
Downstream region at tRNA end position 
tagtaccgan
Secondary structure (Cloverleaf model)
>ENV08001692	Pro	TGG
                   C      GAtt tagtaccgan
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     T   C
                     G - C          T A
                    T     C G T C C     A
    C C G A        A      | | | | |     G
  C         T G C G       G C A G G     C
  G           | | |                 T T
  G         T C G C
    T C A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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