The detailed information of tRNA gene sequence


Sequence ID>ENV08001693
Genome IDABNY01021289
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 18
End posion on genome 91
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
acgggttgcc
tRNA gene sequence 
GCCGACGTAGCCCAACTGGCAGAGGCACAAGGTTTAGGTCCTTGGCAGTGAGAGTTCGAG
TCTCTCCGTCGGCCacc
Downstream region at tRNA end position 
ccggggggcg
Secondary structure (Cloverleaf model)
>ENV08001693	Leu	TAG
                   c      Cacc ccggggggcg
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C T C T C     A
      C A A        A      | | | | |     G
    T       C C C G       G A G A G     C
    G         | | |                 T T
    G       A G G C
      C A G        A     GCAGT
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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