The detailed information of tRNA gene sequence


Sequence ID>ENV08001701
Genome IDABNY01028675
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 21
End posion on genome 94
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
atcatataag
tRNA gene sequence 
GCGGGTGTAGCCAAGTGGTTAAGGCNGTGGGTTGTGGTTCCACTATTCGCGGGTTCGATT
CCCGTTACTCNCCCtt
Downstream region at tRNA end position 
ttttgatatg
Secondary structure (Cloverleaf model)
>ENV08001701	His	GTG
                   g      CCtt ttttgatatg
                     G - C
                     C   N
                     G - C
                     G + T
                     G - C
                     T - A
                     G + T          T T
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          N     TATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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