The detailed information of tRNA gene sequence


Sequence ID>ENV08001702
Genome IDABNY01028851
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 22
End posion on genome 95
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gtcatataag
tRNA gene sequence 
GCGGGTGTAGCCAAGTGGTTAAGGCAGTGGGTTGTGGTTCCACTATTCGCGGGTTCGATT
CCCGTTACTCGCCCtt
Downstream region at tRNA end position 
tttgatatgt
Secondary structure (Cloverleaf model)
>ENV08001702	His	GTG
                   g      CCtt tttgatatgt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G + T          T T
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     TATTC
                    G - C
                    T - A
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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