The detailed information of tRNA gene sequence


Sequence ID>ENV08001705
Genome IDABNY01036358
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 108
End posion on genome 23
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnnna
tRNA gene sequence 
GGGGGTGCGCCGGAGTTGGAGAGCCGGGCCAGACTGTAAATCTGGTGTTTCGACTGAATA
GGTTCGAATCCTATCACCCCACACC
Downstream region at tRNA end position 
Tcttgataag
Secondary structure (Cloverleaf model)
>ENV08001705	Tyr	GTA
                   a      CACC Tcttgataag
                     G   A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    C     T A T C C     A
    T T G A        G      | | | | |     G
  G         G G C C       A T A G G     C
  G         | | | |                 T T
  A         C C G G
    G A G          G     TGTTTCGACTGA
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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