The detailed information of tRNA gene sequence


Sequence ID>ENV08001708
Genome IDABNY01042488
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 34
End posion on genome 107
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
gccgtacagg
tRNA gene sequence 
GCGGGTGTAGTTCAACGGTAGAACCTCAGCCTTCCAAGCTGATGATGTGGGTTCGATTCC
CATCACCCGCTCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001708	Gly	TCC
                   g      TCCA nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      C     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        C     TGAT
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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