The detailed information of tRNA gene sequence


Sequence ID>ENV08001709
Genome IDABNY01042852
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 16
End posion on genome 88
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
aatgttggta
tRNA gene sequence 
TGGGGCGGTCGCCAAGTGGTAAGGCAGCGGACTTTGACTCCGCTATTCGTAGGTTCGAAT
CCTGCCGCCCCAGtta
Downstream region at tRNA end position 
acagatttat
Secondary structure (Cloverleaf model)
>ENV08001709	Gln	TTG
                   a      Gtta acagatttat
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    G     C G T C C     A
      G A A        T      | + | | |     G
    T       C C G C       G T A G G     C
    G         |                     T T
    G       A G G C
      T A          A     TATTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       C
                  T       A
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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