The detailed information of tRNA gene sequence


Sequence ID>ENV08001713
Genome IDABNY01068850
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 27
End posion on genome 98
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaatttact
tRNA gene sequence 
GCTACGGTGGCTGATAGGTTAGGCAGCTGACTGCAAATCAGTTTTAGGCAGGTTCGAATC
CTGTCCGTAGCTnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001713	Cys	GCA
                   t      Tnnn nnnnnnnnnn
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C
                     G - C          T A
                    T     T G T C C     A
        T A        G      + | | | |     G
      A     G T C G       G C A G G     C
      G       + | |                 T T
      G     A G G C
        T T        A     TTTAG
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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