The detailed information of tRNA gene sequence


Sequence ID>ENV08001714
Genome IDABNY01072206
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from plasmids from marine microbial community in low salinity saltern in San Diego, CA
Species
Start position on genome 12
End posion on genome 87
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
agcactttgg
tRNA gene sequence 
TGGGGTGTAGTTCAGTCGGTAGAACGGTGGACTGTTAATCCATATGTCACAGGTTCGATC
CCTGTCACCCCAGCAA
Downstream region at tRNA end position 
aattgctttn
Secondary structure (Cloverleaf model)
>ENV08001714	Asn	GTT
                   g      GCAA aattgctttn
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          C T
                    T     T G T C C     A
      T G A        A      | | | | |     G
    C       C T T G       A C A G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    G + T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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