The detailed information of tRNA gene sequence


Sequence ID>ENV08001717
Genome IDABNZ01002496
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 27
End posion on genome 103
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
aaagagaaac
tRNA gene sequence 
CCCAACGTAGCTCAACTGGATAGAGCAGGGAACTTCTATTTCCAAGGTTGTAGGTTCAAG
TCCTACCGTGGGGACCA
Downstream region at tRNA end position 
aacactagag
Secondary structure (Cloverleaf model)
>ENV08001717	Arg	TCT
                   c      ACCA aacactagag
                     C - G
                     C - G
                     C - G
                     A   G
                     A - T
                     C - G
                     G - C          T G
                    T     C A T C C     A
      C A A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    G   A
                    G - C
                    G - C
                    A - T
                    A - T
                  C       T
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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