The detailed information of tRNA gene sequence


Sequence ID>ENV08001731
Genome IDABNZ01018693
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 90
End posion on genome 15
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
atcggcgtaT
tRNA gene sequence 
GGGCTCGTAGAGAAACTGGCTAACTCACTTGTTTTGCAAGCAAGAAACTATGGGTTCGAA
TCCCATCGAGTCCATta
Downstream region at tRNA end position 
tagcgggttg
Secondary structure (Cloverleaf model)
>ENV08001731	Ala	TGC
                   T      ATta tagcgggttg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C A A        A      | | | | |     G
    T       A G A G       A T G G G     C
    G         | | |                 T T
    G       A C T C
      C T A        A     AAACT
                    C - G
                    T - A
                    T - A
                    G - C
                    T + G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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