The detailed information of tRNA gene sequence


Sequence ID>ENV08001737
Genome IDABOA01009460
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 9
End posion on genome 81
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnacatatta
tRNA gene sequence 
GCTGAGGTAGCTCAATTGGTAGAGCGATACCCTGTTAAGGTATAGGTTTGAGGTTCGAGC
CCTCACCTCGGCGtaa
Downstream region at tRNA end position 
gctttatata
Secondary structure (Cloverleaf model)
>ENV08001737	Asn	GTT
                   a      Gtaa gctttatata
                     G - C
                     C - G
                     T + G
                     G - C
                     A - T
                     G - C
                     G - C          C G
                    T     A C T C C     A
      T A A        A      | | | | |     G
    T       C T C G       T G A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTT
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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