The detailed information of tRNA gene sequence


Sequence ID>ENV08001738
Genome IDABOA01016843
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 14
End posion on genome 92
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ttgtagtagc
tRNA gene sequence 
GCTTGCGTAGCTCAGTTTGGCCAGAGCATTTCCCTTGTAAGGAAAAACGGCGGGAGTTCA
AATCTCCCCGCAAGCTTCA
Downstream region at tRNA end position 
acaaatgagc
Secondary structure (Cloverleaf model)
>ENV08001738	Thr	TGT
                   c      TTCA acaaatgagc
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C
                     C - G
                     G - C          T A
                    T     C C C T C     A
    T T G A        A      | | | | |     A
  T         C T C G       G G G A G     C
  G         | | | |                 T T
  G         G A G C
    C C A          A     AACGGC
                    T - A
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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