The detailed information of tRNA gene sequence


Sequence ID>ENV08001742
Genome IDABOB01000334
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 41
End posion on genome 113
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
ccgaggtgag
tRNA gene sequence 
GCCGTCGTAGCTCAGTTGGTAGAGCACCTCGCTGTTAACGAGGTGGTCCCAGGTTCGAGT
CCTGGCGACGGCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001742	Asn	GTT
                   g      Gnnn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     C - G
                     G - C          T G
                    T     G G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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