The detailed information of tRNA gene sequence


Sequence ID>ENV08001745
Genome IDABOD01000714
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 55
End posion on genome 127
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
gacaatacgc
tRNA gene sequence 
GCCTGGGTAGCTTAGCGGTAAAGCGCGTCCTTGGTAAGGACGAGAGCCCGGGTTCAAATC
CCGGCCTAGGCTCtn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001745	Thr	GGT
                   c      TCtn nnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T
                     G - C
                     G - C          T A
                    T     G G C C C     A
        G A        A      | | | | |     A
      C     T T C G       C C G G G     C
      G     | | | |                 T T
      G     A A G C
        T A        G     AGAGC
                    C - G
                    G - C
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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