The detailed information of tRNA gene sequence


Sequence ID>ENV08001746
Genome IDABOD01001150
Search identical group
Phylum/Classsaltern metagenome; microbial fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 31
End posion on genome 104
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
gacgcaatcc
tRNA gene sequence 
GCCGCGTTCGTCTAGGGGTCTAGGACGCCGGCCTCTCACGCCGGTAGCACGGGTTCGAAT
CCCGTACGCGGTACat
Downstream region at tRNA end position 
cacgacgtct
Secondary structure (Cloverleaf model)
>ENV08001746	Glu	CTC
                   c      ACat cacgacgtct
                     G + T
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     TAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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