The detailed information of tRNA gene sequence


Sequence ID>ENV08001754
Genome IDABOE01017422
Search identical group
Phylum/Classsaltern metagenome; viral fraction from low salinity saltern in San Diego, CA
Species
Start position on genome 14
End posion on genome 89
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
aaatttaata
tRNA gene sequence 
TGGTCGTTAGCTCAGTTGGGAGAGCATCGCCCTTACAAGGCGAGGGTCACTGGTTCAAGT
CCAGTACGACCCACCA
Downstream region at tRNA end position 
ttcttagagt
Secondary structure (Cloverleaf model)
>ENV08001754	Val	TAC
                   a      ACCA ttcttagagt
                     T   C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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