The detailed information of tRNA gene sequence


Sequence ID>ENV08001763
Genome IDABOF01008597
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 117
End posion on genome 45
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGGTGTGTGGTCCAATGGTTACGATACGGCCTTGACATGGCCGGGACGAAGGTTCGACTC
CTTCCATACCCACtt
Downstream region at tRNA end position 
cttaccgaag
Secondary structure (Cloverleaf model)
>ENV08001763	Val	GAC
                   c      ACtt cttaccgaag
                     G - C
                     G - C
                     G - C
                     T - A
                     G + T
                     T - A
                     G - C          T C
                    T     C T T C C     A
      T A A        G      | | | | |     G
    G       C C T G       G A A G G     C
    G         | | +                 T T
    T       C G A T
      T A          A     GGAC
                    C - G
                    G - C
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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