The detailed information of tRNA gene sequence


Sequence ID>ENV08001764
Genome IDABOF01008711
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 98
End posion on genome 22
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atgtgtaaca
tRNA gene sequence 
GCCCCGGTAGCTCAACCGGATAGAGCATCGGCCTTCTAAGCCGAGGGTTGCAGGTTCGAG
TCCTGCTCGGGGCGCCA
Downstream region at tRNA end position 
atactagaaa
Secondary structure (Cloverleaf model)
>ENV08001764	Arg	TCT
                   a      GCCA atactagaaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     C G T C C     A
      C A A        A      | | | | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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