The detailed information of tRNA gene sequence


Sequence ID>ENV08001767
Genome IDABOF01020030
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 81
End posion on genome 9
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tacttaccgt
tRNA gene sequence 
GGGCTTGGAGCCTATGAGGACAGGCATCGGGCTTTTAACCCGACAATAGTGGGTTCAAAT
CCCATCAAGCCCTtac
Downstream region at tRNA end position 
tgaaannnnn
Secondary structure (Cloverleaf model)
>ENV08001767	Lys	TTT
                   t      Ttac tgaaannnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    G     T A C C C     A
      G T A        A      + | | | |     A
    A       T C C G       G T G G G     C
    G       | | | |                 T T
    G       A G G C
      A C          A     CAATA
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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