The detailed information of tRNA gene sequence


Sequence ID>ENV08001768
Genome IDABOF01027507
Search identical group
Phylum/Classsaltern metagenome; viral fraction from high salinity saltern in San Diego, CA
Species
Start position on genome 26
End posion on genome 103
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
acactcgcca
tRNA gene sequence 
CTCCCCGTAGCATCAACTGGACAGAGCGCCGCGCTTCGAACGCGGAGGTTGGGGGTTCGA
GTCCTTCCGGGGAGGCAA
Downstream region at tRNA end position 
acttcgcgnn
Secondary structure (Cloverleaf model)
>ENV08001768	Arg	TCG
                   a      GCAA acttcgcgnn
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C T T C C     A
    C A A C        A      | + + | |     G
  T         T A C G       G G G G G     C
  G         +   | |                 T T
  G         G A G C
    A C A          G     AGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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